PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj0g3v0297209.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family NAC
Protein Properties Length: 193aa    MW: 22178.1 Da    PI: 8.7121
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj0g3v0297209.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM107.12.1e-33501911128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk....... 79 
                      lp+G++F+Ptd+e++ e+L++kv+++ ++l+        +++   +i++++P++Lp  v+++    +fF++ +k+y+tg+rk+r+++       
  Lj0g3v0297209.1  50 LPAGVKFDPTDHEIL-EHLEAKVRSDIHKLHPlidefipTLEGEnGICYTHPEKLP-GVSKDGLIRHFFHRPSKAYTTGTRKRRKVHsddedgg 141
                      799***********9.99*****99984443333333222333336**********.555555677******************8444555544 PP

              NAM  80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                      + +W++tgk++++++ + el+g kk+Lv+y   g+++k+ekt+Wvmh+y+l
  Lj0g3v0297209.1 142 ETRWHKTGKTRPIYN-NAELKGYKKILVLYtnYGKQRKPEKTNWVMHQYHL 191
                      778************.999***********6657999999*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.01E-3345192IPR003441NAC domain
PROSITE profilePS5100529.82350193IPR003441NAC domain
PfamPF023651.2E-1551191IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MTQCSDDPEI NNNIIIQEGR KDSLIRTCPT CGHHIKCQDQ GGGIHDLPGL PAGVKFDPTD  60
HEILEHLEAK VRSDIHKLHP LIDEFIPTLE GENGICYTHP EKLPGVSKDG LIRHFFHRPS  120
KAYTTGTRKR RKVHSDDEDG GETRWHKTGK TRPIYNNAEL KGYKKILVLY TNYGKQRKPE  180
KTNWVMHQYH LRS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2351022e-83AC235102.1 Glycine max strain Williams 82 clone GM_WBa0006K18, complete sequence.
GenBankAC2351652e-83AC235165.1 Glycine max strain Williams 82 clone GM_WBa0104E24, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003540939.11e-128PREDICTED: NAC domain-containing protein 73-like
SwissprotO494595e-99NAC73_ARATH; NAC domain-containing protein 73
TrEMBLA0A0B2SSP21e-128A0A0B2SSP2_GLYSO; NAC domain-containing protein 8
TrEMBLI1LS801e-128I1LS80_SOYBN; Uncharacterized protein
STRINGGLYMA12G13710.11e-127(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF122834108
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-100NAC domain containing protein 73